STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVH24_041183AA_TRNA_LIGASE_II domain-containing protein. (542 aa)    
Predicted Functional Partners:
DVH24_028580
tRNA-synt_1g domain-containing protein.
  
 0.994
DVH24_000764
Uncharacterized protein.
  
 0.994
DVH24_010376
tRNA-synt_1g domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.994
DVH24_000767
tRNA-binding domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.994
DVH24_000977
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.980
DVH24_025505
Uncharacterized protein.
   
 0.902
DVH24_002214
Uncharacterized protein.
   
 0.902
DVH24_041397
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.902
DVH24_016288
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.888
DVH24_033112
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.888
Your Current Organism:
Malus domestica
NCBI taxonomy Id: 3750
Other names: M. domestica, Malus communis, Malus communis Desf., Malus domestica Borkh., nom. cons. prop., Malus pumila auct., Malus pumila var. domestica, Malus pumila var. domestica (Borkh.) C.K.Schneid., Malus sylvestris var. domestica, Malus sylvestris var. domestica (Borkh.) Mansf., Malus x domestica, Pyrus malus, Pyrus malus L., apple, apple tree, cultivated apple
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.