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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVH24_041201Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (356 aa)    
Predicted Functional Partners:
DVH24_022096
Cytochrome c domain-containing protein.
      
 0.761
DVH24_001671
Uncharacterized protein.
      
 0.566
DVH24_005425
Protein kinase domain-containing protein.
  
 
  0.433
psbA
Photosystem II protein D1; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors.
      
 0.431
DVH24_019774
Uncharacterized protein.
  
 
  0.430
DVH24_011955
Protein kinase domain-containing protein.
  
 
  0.418
DVH24_024971
Protein kinase domain-containing protein.
  
 
  0.418
DVH24_022360
Protein kinase domain-containing protein.
  
 
  0.417
DVH24_026321
Uncharacterized protein.
  
 
  0.413
DVH24_015397
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
 
  0.412
Your Current Organism:
Malus domestica
NCBI taxonomy Id: 3750
Other names: M. domestica, Malus communis, Malus communis Desf., Malus domestica Borkh., nom. cons. prop., Malus pumila auct., Malus pumila var. domestica, Malus pumila var. domestica (Borkh.) C.K.Schneid., Malus sylvestris var. domestica, Malus sylvestris var. domestica (Borkh.) Mansf., Malus x domestica, Pyrus malus, Pyrus malus L., apple, apple tree, cultivated apple
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