DVH24_004479 protein (Malus domestica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

DVH24_004479

Uncharacterized protein. (214 aa)

Predicted Functional Partners:

DVH24_039569

0.478

DVH24_032972

0.478

DVH24_030252

0.478

DVH24_020098

0.478

DVH24_013898

0.478

DVH24_024757

0.478

DVH24_008755

0.478

DVH24_009978

0.478

DVH24_025865

0.478

DVH24_018460

0.478

Your Current Organism:

Malus domestica

NCBI taxonomy Id: 3750
Other names: M. domestica, Malus communis, Malus communis Desf., Malus domestica Borkh., nom. cons. prop., Malus pumila auct., Malus pumila var. domestica, Malus pumila var. domestica (Borkh.) C.K.Schneid., Malus sylvestris var. domestica, Malus sylvestris var. domestica (Borkh.) Mansf., Malus x domestica, Pyrus malus, Pyrus malus L., apple, apple tree, cultivated apple

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DVH24_004479	DVH24_008755	A0A498IEL5	A0A498JSN2	Uncharacterized protein.	Uncharacterized protein.	0.478
DVH24_004479	DVH24_009978	A0A498IEL5	A0A498JUP8	Uncharacterized protein.	Uncharacterized protein.	0.478
DVH24_004479	DVH24_013898	A0A498IEL5	A0A498JI10	Uncharacterized protein.	Uncharacterized protein.	0.478
DVH24_004479	DVH24_018460	A0A498IEL5	A0A498KFJ4	Uncharacterized protein.	Uncharacterized protein.	0.478
DVH24_004479	DVH24_020098	A0A498IEL5	A0A498J8D5	Uncharacterized protein.	Uncharacterized protein.	0.478
DVH24_004479	DVH24_024757	A0A498IEL5	A0A498JML9	Uncharacterized protein.	Uncharacterized protein.	0.478
DVH24_004479	DVH24_025865	A0A498IEL5	A0A498KF00	Uncharacterized protein.	Uncharacterized protein.	0.478
DVH24_004479	DVH24_030252	A0A498IEL5	A0A498IT66	Uncharacterized protein.	Uncharacterized protein.	0.478
DVH24_004479	DVH24_032972	A0A498IEL5	A0A498IMB3	Uncharacterized protein.	Uncharacterized protein.	0.478
DVH24_004479	DVH24_039569	A0A498IEL5	A0A498I184	Uncharacterized protein.	Uncharacterized protein.	0.478
DVH24_008755	DVH24_004479	A0A498JSN2	A0A498IEL5	Uncharacterized protein.	Uncharacterized protein.	0.478
DVH24_009978	DVH24_004479	A0A498JUP8	A0A498IEL5	Uncharacterized protein.	Uncharacterized protein.	0.478
DVH24_013898	DVH24_004479	A0A498JI10	A0A498IEL5	Uncharacterized protein.	Uncharacterized protein.	0.478
DVH24_018460	DVH24_004479	A0A498KFJ4	A0A498IEL5	Uncharacterized protein.	Uncharacterized protein.	0.478
DVH24_020098	DVH24_004479	A0A498J8D5	A0A498IEL5	Uncharacterized protein.	Uncharacterized protein.	0.478
DVH24_024757	DVH24_004479	A0A498JML9	A0A498IEL5	Uncharacterized protein.	Uncharacterized protein.	0.478
DVH24_025865	DVH24_004479	A0A498KF00	A0A498IEL5	Uncharacterized protein.	Uncharacterized protein.	0.478
DVH24_030252	DVH24_004479	A0A498IT66	A0A498IEL5	Uncharacterized protein.	Uncharacterized protein.	0.478
DVH24_032972	DVH24_004479	A0A498IMB3	A0A498IEL5	Uncharacterized protein.	Uncharacterized protein.	0.478
DVH24_039569	DVH24_004479	A0A498I184	A0A498IEL5	Uncharacterized protein.	Uncharacterized protein.	0.478

Server load: low (16%) [HD]

Permalink

Network

Cooccurrence

Experiments

Neighborhood

Databases

Fusion

Textmining

Coexpression

© STRING Consortium 2023

Credits

Access

Info

About