STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVH24_026983Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (360 aa)    
Predicted Functional Partners:
DVH24_012898
Uncharacterized protein.
      
 0.517
DVH24_037699
3-ketoacyl-CoA synthase.
      
 0.517
DVH24_042354
FAE domain-containing protein.
      
 0.517
DVH24_021462
3-ketoacyl-CoA synthase.
      
 0.517
DVH24_041432
Beta-amylase; Belongs to the glycosyl hydrolase 14 family.
      
 0.511
DVH24_013195
Abhydrolase_3 domain-containing protein.
      
 0.511
DVH24_013197
Abhydrolase_3 domain-containing protein.
      
 0.511
DVH24_042424
Abhydrolase_3 domain-containing protein.
      
 0.511
DVH24_012432
Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family.
      
 0.405
DVH24_012424
Patatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family.
      
 0.405
Your Current Organism:
Malus domestica
NCBI taxonomy Id: 3750
Other names: M. domestica, Malus communis, Malus communis Desf., Malus domestica Borkh., nom. cons. prop., Malus pumila auct., Malus pumila var. domestica, Malus pumila var. domestica (Borkh.) C.K.Schneid., Malus sylvestris var. domestica, Malus sylvestris var. domestica (Borkh.) Mansf., Malus x domestica, Pyrus malus, Pyrus malus L., apple, apple tree, cultivated apple
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