STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVH24_022111BTP domain-containing protein. (259 aa)    
Predicted Functional Partners:
DVH24_022005
TAFII28 domain-containing protein.
   
 0.986
DVH24_001077
Uncharacterized protein.
    
 0.984
DVH24_006505
Uncharacterized protein.
    
 0.979
DVH24_023634
Uncharacterized protein.
    
 0.956
DVH24_009016
Peptidase_M1 domain-containing protein.
    
 0.956
DVH24_042111
TAFII55_N domain-containing protein.
    
 0.954
DVH24_038019
TAFII55_N domain-containing protein.
    
 0.954
DVH24_009617
Uncharacterized protein.
    
 0.953
DVH24_039133
TAF4 domain-containing protein.
    
 0.953
DVH24_012774
WD_REPEATS_REGION domain-containing protein.
    
 0.934
Your Current Organism:
Malus domestica
NCBI taxonomy Id: 3750
Other names: M. domestica, Malus communis, Malus communis Desf., Malus domestica Borkh., nom. cons. prop., Malus pumila auct., Malus pumila var. domestica, Malus pumila var. domestica (Borkh.) C.K.Schneid., Malus sylvestris var. domestica, Malus sylvestris var. domestica (Borkh.) Mansf., Malus x domestica, Pyrus malus, Pyrus malus L., apple, apple tree, cultivated apple
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.