STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVH24_017107Uncharacterized protein. (149 aa)    
Predicted Functional Partners:
DVH24_016417
Ribosomal_L18_c domain-containing protein.
   
 
 0.774
DVH24_005160
Uncharacterized protein.
   
   0.748
DVH24_038358
Uncharacterized protein.
   
   0.744
DVH24_004454
60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.
    
   0.740
DVH24_011355
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.
   
   0.697
DVH24_021855
Uncharacterized protein.
   
 
 0.637
DVH24_010836
Uncharacterized protein.
   
 
 0.637
DVH24_040027
Uncharacterized protein.
   
 
 0.602
DVH24_008285
Uncharacterized protein.
   
 
 0.602
DVH24_003979
Uncharacterized protein.
   
 
 0.602
Your Current Organism:
Malus domestica
NCBI taxonomy Id: 3750
Other names: M. domestica, Malus communis, Malus communis Desf., Malus domestica Borkh., nom. cons. prop., Malus pumila auct., Malus pumila var. domestica, Malus pumila var. domestica (Borkh.) C.K.Schneid., Malus sylvestris var. domestica, Malus sylvestris var. domestica (Borkh.) Mansf., Malus x domestica, Pyrus malus, Pyrus malus L., apple, apple tree, cultivated apple
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.