STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVH24_028745LRRNT_2 domain-containing protein. (188 aa)    
Predicted Functional Partners:
DVH24_012441
Uncharacterized protein.
    
 
 0.538
DVH24_020744
Uncharacterized protein.
    
 
 0.538
DVH24_030108
Uncharacterized protein.
  
 
   0.505
DVH24_006277
LRRNT_2 domain-containing protein.
  
 
  0.497
DVH24_012150
Uncharacterized protein.
  
     0.495
DVH24_014816
Uncharacterized protein.
  
     0.492
DVH24_026948
Malectin domain-containing protein.
  
 
  0.491
DVH24_036631
Uncharacterized protein.
  
     0.485
DVH24_025819
Uncharacterized protein.
  
     0.481
DVH24_003964
Uncharacterized protein.
  
     0.478
Your Current Organism:
Malus domestica
NCBI taxonomy Id: 3750
Other names: M. domestica, Malus communis, Malus communis Desf., Malus domestica Borkh., nom. cons. prop., Malus pumila auct., Malus pumila var. domestica, Malus pumila var. domestica (Borkh.) C.K.Schneid., Malus sylvestris var. domestica, Malus sylvestris var. domestica (Borkh.) Mansf., Malus x domestica, Pyrus malus, Pyrus malus L., apple, apple tree, cultivated apple
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.