STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVH24_042466Uncharacterized protein. (260 aa)    
Predicted Functional Partners:
DVH24_002505
Uncharacterized protein.
    
 0.865
DVH24_020165
Uncharacterized protein.
    
 0.809
DVH24_007984
TFIIE beta domain-containing protein.
    
 0.782
DVH24_035056
Uncharacterized protein.
    
 0.766
DVH24_035175
Uncharacterized protein.
    
 0.766
DVH24_034285
RPOLD domain-containing protein.
    
 0.765
DVH24_021696
RPOLD domain-containing protein.
    
 0.765
DVH24_042272
RNA_pol_L_2 domain-containing protein.
    
 0.764
DVH24_021546
RNA_pol_L_2 domain-containing protein.
    
 0.764
DVH24_042749
Uncharacterized protein.
    
 0.753
Your Current Organism:
Malus domestica
NCBI taxonomy Id: 3750
Other names: M. domestica, Malus communis, Malus communis Desf., Malus domestica Borkh., nom. cons. prop., Malus pumila auct., Malus pumila var. domestica, Malus pumila var. domestica (Borkh.) C.K.Schneid., Malus sylvestris var. domestica, Malus sylvestris var. domestica (Borkh.) Mansf., Malus x domestica, Pyrus malus, Pyrus malus L., apple, apple tree, cultivated apple
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.