STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVH24_031634C2 NT-type domain-containing protein. (1033 aa)    
Predicted Functional Partners:
DVH24_017129
WD_REPEATS_REGION domain-containing protein.
    
 0.720
DVH24_032650
ANAPC5 domain-containing protein.
   
 0.720
DVH24_026496
DOC domain-containing protein.
    
 0.720
DVH24_024351
APC1_C domain-containing protein.
    
 0.718
DVH24_013298
Uncharacterized protein.
    
 
 0.670
DVH24_041441
HSA domain-containing protein.
    
 0.657
DVH24_041442
Uncharacterized protein.
    
 0.657
DVH24_026914
TPR_REGION domain-containing protein.
    
 0.648
DVH24_003015
Uncharacterized protein.
    
 0.648
DVH24_027395
Uncharacterized protein.
    
 0.635
Your Current Organism:
Malus domestica
NCBI taxonomy Id: 3750
Other names: M. domestica, Malus communis, Malus communis Desf., Malus domestica Borkh., nom. cons. prop., Malus pumila auct., Malus pumila var. domestica, Malus pumila var. domestica (Borkh.) C.K.Schneid., Malus sylvestris var. domestica, Malus sylvestris var. domestica (Borkh.) Mansf., Malus x domestica, Pyrus malus, Pyrus malus L., apple, apple tree, cultivated apple
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.