Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DVH24_009182Uncharacterized protein. (288 aa)    
Predicted Functional Partners:
DVH24_041441
HSA domain-containing protein.
   
 0.640
DVH24_041442
Uncharacterized protein.
   
 0.640
DVH24_016299
Uncharacterized protein.
    
  0.568
DVH24_033115
Uncharacterized protein.
    
  0.568
DVH24_029323
Uncharacterized protein.
   
 0.520
DVH24_017990
Uncharacterized protein.
   
 0.520
DVH24_036782
ANK_REP_REGION domain-containing protein.
    
  0.505
DVH24_015353
Uncharacterized protein.
    
  0.505
DVH24_011662
Uncharacterized protein.
    
 0.415
DVH24_022926
PPR_long domain-containing protein.
    
 
 0.411
Your Current Organism:
Malus domestica
NCBI taxonomy Id: 3750
Other names: M. domestica, Malus communis, Malus communis Desf., Malus domestica Borkh., nom. cons. prop., Malus pumila auct., Malus pumila var. domestica, Malus pumila var. domestica (Borkh.) C.K.Schneid., Malus sylvestris var. domestica, Malus sylvestris var. domestica (Borkh.) Mansf., Malus x domestica, Pyrus malus, Pyrus malus L., apple, apple tree, cultivated apple
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