STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVH24_024516TIR domain-containing protein. (369 aa)    
Predicted Functional Partners:
DVH24_036264
Uncharacterized protein.
  
     0.468
DVH24_035679
Uncharacterized protein.
  
     0.453
DVH24_002113
Uncharacterized protein.
  
     0.452
DVH24_018830
Uncharacterized protein.
  
     0.450
DVH24_041665
Uncharacterized protein.
  
     0.447
DVH24_037811
Uncharacterized protein.
  
     0.445
DVH24_008923
Uncharacterized protein.
  
     0.439
DVH24_041785
Uncharacterized protein.
  
     0.433
DVH24_019576
Uncharacterized protein.
  
     0.432
DVH24_036268
Uncharacterized protein.
  
     0.430
Your Current Organism:
Malus domestica
NCBI taxonomy Id: 3750
Other names: M. domestica, Malus communis, Malus communis Desf., Malus domestica Borkh., nom. cons. prop., Malus pumila auct., Malus pumila var. domestica, Malus pumila var. domestica (Borkh.) C.K.Schneid., Malus sylvestris var. domestica, Malus sylvestris var. domestica (Borkh.) Mansf., Malus x domestica, Pyrus malus, Pyrus malus L., apple, apple tree, cultivated apple
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