STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVH24_021391ABC transporter domain-containing protein. (551 aa)    
Predicted Functional Partners:
DVH24_027509
Uncharacterized protein.
  
   0.774
DVH24_016417
Ribosomal_L18_c domain-containing protein.
  
   0.772
DVH24_012921
50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.
   
   0.751
DVH24_021955
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
  
 
 0.745
DVH24_023897
Uncharacterized protein.
  
 
 0.745
DVH24_041449
Uncharacterized protein.
   
 
 0.697
DVH24_037574
Uncharacterized protein.
   
 
 0.697
DVH24_029024
Uncharacterized protein.
  
   0.675
DVH24_017645
Uncharacterized protein.
  
   0.675
DVH24_016299
Uncharacterized protein.
   
 
 0.658
Your Current Organism:
Malus domestica
NCBI taxonomy Id: 3750
Other names: M. domestica, Malus communis, Malus communis Desf., Malus domestica Borkh., nom. cons. prop., Malus pumila auct., Malus pumila var. domestica, Malus pumila var. domestica (Borkh.) C.K.Schneid., Malus sylvestris var. domestica, Malus sylvestris var. domestica (Borkh.) Mansf., Malus x domestica, Pyrus malus, Pyrus malus L., apple, apple tree, cultivated apple
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.