Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARF3 | DVH24_001754 | A0A498ISB8 | A0A498I3X4 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | 0.777 |
ARF3 | DVH24_010808 | A0A498ISB8 | A0A498JWZ9 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Uncharacterized protein. | 0.485 |
DVH24_001754 | ARF3 | A0A498I3X4 | A0A498ISB8 | Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.777 |
DVH24_001754 | DVH24_010808 | A0A498I3X4 | A0A498JWZ9 | Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | Uncharacterized protein. | 0.485 |
DVH24_001754 | DVH24_011476 | A0A498I3X4 | A0A498K1C7 | Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.777 |
DVH24_001754 | DVH24_012978 | A0A498I3X4 | A0A498HSP0 | Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.768 |
DVH24_001754 | DVH24_020135 | A0A498I3X4 | A0A498JBE7 | Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.768 |
DVH24_010808 | ARF3 | A0A498JWZ9 | A0A498ISB8 | Uncharacterized protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.485 |
DVH24_010808 | DVH24_001754 | A0A498JWZ9 | A0A498I3X4 | Uncharacterized protein. | Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | 0.485 |
DVH24_010808 | DVH24_011476 | A0A498JWZ9 | A0A498K1C7 | Uncharacterized protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.485 |
DVH24_010808 | DVH24_012978 | A0A498JWZ9 | A0A498HSP0 | Uncharacterized protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.481 |
DVH24_010808 | DVH24_013424 | A0A498JWZ9 | A0A498HGS7 | Uncharacterized protein. | Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | 0.485 |
DVH24_010808 | DVH24_014722 | A0A498JWZ9 | A0A498K6S0 | Uncharacterized protein. | Aa_trans domain-containing protein. | 0.481 |
DVH24_010808 | DVH24_020135 | A0A498JWZ9 | A0A498JBE7 | Uncharacterized protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.481 |
DVH24_010808 | DVH24_024281 | A0A498JWZ9 | A0A498JID9 | Uncharacterized protein. | Aa_trans domain-containing protein. | 0.481 |
DVH24_010808 | DVH24_036100 | A0A498JWZ9 | A0A498IFF6 | Uncharacterized protein. | Aa_trans domain-containing protein. | 0.481 |
DVH24_010808 | LAX2 | A0A498JWZ9 | A0A498KT11 | Uncharacterized protein. | Aa_trans domain-containing protein. | 0.481 |
DVH24_011476 | DVH24_001754 | A0A498K1C7 | A0A498I3X4 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | 0.777 |
DVH24_011476 | DVH24_010808 | A0A498K1C7 | A0A498JWZ9 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Uncharacterized protein. | 0.485 |
DVH24_012978 | DVH24_001754 | A0A498HSP0 | A0A498I3X4 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | 0.768 |
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