STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVH24_015055Uncharacterized protein. (1071 aa)    
Predicted Functional Partners:
DVH24_029509
Uncharacterized protein.
   
 0.966
DVH24_018190
TPR_REGION domain-containing protein.
   
 0.966
DVH24_034285
RPOLD domain-containing protein.
   
 0.963
DVH24_021696
RPOLD domain-containing protein.
   
 0.963
DVH24_027395
Uncharacterized protein.
    
 0.962
DVH24_000276
Uncharacterized protein.
    
 0.962
DVH24_002505
Uncharacterized protein.
    
 0.961
DVH24_023725
Uncharacterized protein.
   
 0.950
DVH24_008933
Uncharacterized protein.
   
 0.950
DVH24_008929
Uncharacterized protein.
   
 0.950
Your Current Organism:
Malus domestica
NCBI taxonomy Id: 3750
Other names: M. domestica, Malus communis, Malus communis Desf., Malus domestica Borkh., nom. cons. prop., Malus pumila auct., Malus pumila var. domestica, Malus pumila var. domestica (Borkh.) C.K.Schneid., Malus sylvestris var. domestica, Malus sylvestris var. domestica (Borkh.) Mansf., Malus x domestica, Pyrus malus, Pyrus malus L., apple, apple tree, cultivated apple
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