Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DVH24_030593TIR domain-containing protein. (834 aa)    
Predicted Functional Partners:
DVH24_002113
Uncharacterized protein.
  
     0.504
DVH24_008923
Uncharacterized protein.
  
     0.491
DVH24_038425
Ubiquitin-like domain-containing protein.
  
     0.485
DVH24_019576
Uncharacterized protein.
  
     0.474
DVH24_028038
Uncharacterized protein.
  
     0.472
DVH24_001001
Uncharacterized protein.
  
     0.471
DVH24_003942
LRRNT_2 domain-containing protein.
  
     0.468
DVH24_038420
Uncharacterized protein.
  
 
   0.468
DVH24_019561
Uncharacterized protein.
  
     0.464
DVH24_041598
Uncharacterized protein.
  
     0.461
Your Current Organism:
Malus domestica
NCBI taxonomy Id: 3750
Other names: M. domestica, Malus communis, Malus communis Desf., Malus domestica Borkh., nom. cons. prop., Malus pumila auct., Malus pumila var. domestica, Malus pumila var. domestica (Borkh.) C.K.Schneid., Malus sylvestris var. domestica, Malus sylvestris var. domestica (Borkh.) Mansf., Malus x domestica, Pyrus malus, Pyrus malus L., apple, apple tree, cultivated apple
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