STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVH24_006617Uncharacterized protein. (630 aa)    
Predicted Functional Partners:
DVH24_038358
Uncharacterized protein.
   
 0.769
DVH24_005659
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.735
DVH24_015954
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.735
DVH24_019358
Uncharacterized protein.
   
 0.712
DVH24_000471
Uncharacterized protein.
   
 0.712
DVH24_013360
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.692
DVH24_007381
Uncharacterized protein.
   
 0.692
DVH24_001691
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.692
DVH24_034255
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
   
 0.684
DVH24_042568
Uncharacterized protein.
   
 0.684
Your Current Organism:
Malus domestica
NCBI taxonomy Id: 3750
Other names: M. domestica, Malus communis, Malus communis Desf., Malus domestica Borkh., nom. cons. prop., Malus pumila auct., Malus pumila var. domestica, Malus pumila var. domestica (Borkh.) C.K.Schneid., Malus sylvestris var. domestica, Malus sylvestris var. domestica (Borkh.) Mansf., Malus x domestica, Pyrus malus, Pyrus malus L., apple, apple tree, cultivated apple
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.