STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVH24_018491Uncharacterized protein. (327 aa)    
Predicted Functional Partners:
DVH24_024137
Uncharacterized protein.
      
 0.533
DVH24_037604
PORR domain-containing protein.
      
 0.527
DVH24_001062
Uncharacterized protein.
      
 0.527
DVH24_003690
S4 RNA-binding domain-containing protein.
      
 0.526
DVH24_019361
Protein-lysine N-methyltransferase DVH24_019361; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that methylates elongation factor 1-alpha. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM5 family.
      
 0.521
DVH24_042658
Uncharacterized protein.
      
 0.516
DVH24_000804
Uncharacterized protein.
      
 0.506
DVH24_000992
Uncharacterized protein.
      
 0.506
DVH24_012665
Uncharacterized protein.
      
 0.499
DVH24_020468
Methyltransf_12 domain-containing protein.
      
 0.499
Your Current Organism:
Malus domestica
NCBI taxonomy Id: 3750
Other names: M. domestica, Malus communis, Malus communis Desf., Malus domestica Borkh., nom. cons. prop., Malus pumila auct., Malus pumila var. domestica, Malus pumila var. domestica (Borkh.) C.K.Schneid., Malus sylvestris var. domestica, Malus sylvestris var. domestica (Borkh.) Mansf., Malus x domestica, Pyrus malus, Pyrus malus L., apple, apple tree, cultivated apple
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