STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVH24_017904Peptidase_S26 domain-containing protein. (324 aa)    
Predicted Functional Partners:
CYN
Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family.
   
 0.911
DVH24_034169
UBA domain-containing protein.
    
 0.822
DVH24_000839
UBA domain-containing protein.
    
 0.822
DVH24_013068
Uncharacterized protein.
   
 0.804
DVH24_020049
Uncharacterized protein.
   
 0.804
DVH24_015000
Uncharacterized protein.
    
 0.759
DVH24_014995
Hexosyltransferase; Belongs to the glycosyltransferase 8 family.
    
 0.759
DVH24_015006
Uncharacterized protein.
    
 0.759
DVH24_018853
DNA ligase.
    
 0.752
DVH24_034150
SAP domain-containing protein.
     
 0.718
Your Current Organism:
Malus domestica
NCBI taxonomy Id: 3750
Other names: M. domestica, Malus communis, Malus communis Desf., Malus domestica Borkh., nom. cons. prop., Malus pumila auct., Malus pumila var. domestica, Malus pumila var. domestica (Borkh.) C.K.Schneid., Malus sylvestris var. domestica, Malus sylvestris var. domestica (Borkh.) Mansf., Malus x domestica, Pyrus malus, Pyrus malus L., apple, apple tree, cultivated apple
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