STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rexBATP-dependent helicase; ATP-dependent DNA helicase. (1184 aa)    
Predicted Functional Partners:
addA
Helicase-exonuclease AddAB subunit AddA; ATP-dependent DNA helicase.
 
 
 0.998
ANK62914.1
XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.577
ANK63078.1
single-stranded-DNA-specific exonuclease RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.553
ANK62911.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.485
ANK62860.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.470
ANK62845.1
Nif3-like dinuclear metal center hexameric protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.
 
     0.469
ANK61847.1
Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.426
ANK63264.1
DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.417
ANK62844.1
SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.408
Your Current Organism:
Lactobacillus backii
NCBI taxonomy Id: 375175
Other names: DSM 18080, JCM 18665, L. backii, LMG 23555, LMG:23555, Lactobacillus backi, Lactobacillus backii Tohno et al. 2013, strain L1062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.