STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANK63517.1Proline reductase-associated electron transfer protein PrdC; Derived by automated computational analysis using gene prediction method: Protein Homology. (437 aa)    
Predicted Functional Partners:
ANK61972.1
D-proline reductase (dithiol) proprotein PrdA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.800
ANK61974.1
Proline reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.797
ANK61973.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.786
ANK61977.1
Proline reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.786
ANK61976.1
Proline reductase cluster protein PrdD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.785
ANK61975.1
Proline reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.770
ANK61979.1
Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.756
ANK61963.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.695
ANK62802.1
Thiamine biosynthesis protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
 
   
 0.426
ANK61955.1
Hypothetical protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
 
   
 0.403
Your Current Organism:
Lactobacillus backii
NCBI taxonomy Id: 375175
Other names: DSM 18080, JCM 18665, L. backii, LMG 23555, LMG:23555, Lactobacillus backi, Lactobacillus backii Tohno et al. 2013, strain L1062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.