Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ANK62079.1Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (342 aa)    
Predicted Functional Partners:
ANK62078.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.892
ANK63568.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.809
ANK61377.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
   0.807
ANK62038.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.650
ANK62063.1
Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.649
ANK62067.1
Molybdopterin converting factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.644
ANK62082.1
Hypothetical protein; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.
 
    0.541
ANK62087.1
Molybdopterin biosynthesis protein MoeB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.538
ANK62069.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.470
ANK62080.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.468
Your Current Organism:
Lactobacillus backii
NCBI taxonomy Id: 375175
Other names: DSM 18080, JCM 18665, L. backii, LMG 23555, LMG:23555, Lactobacillus backi, Lactobacillus backii Tohno et al. 2013, strain L1062
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