STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANK63289.1GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (188 aa)    
Predicted Functional Partners:
ANK62911.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.529
ANK63291.1
Polar amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.518
ANK63290.1
Glutamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.517
ANK62257.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.494
ANK61606.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.456
ANK62310.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.436
ANK63596.1
Sodium:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.425
ANK62319.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.412
ANK61604.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.406
ANK62284.1
Dihydrofolate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.405
Your Current Organism:
Lactobacillus backii
NCBI taxonomy Id: 375175
Other names: DSM 18080, JCM 18665, L. backii, LMG 23555, LMG:23555, Lactobacillus backi, Lactobacillus backii Tohno et al. 2013, strain L1062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.