Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
amaB1N-carbamoyl-L-amino acid amidohydrolase. (424 aa)    
Predicted Functional Partners:
mma_0517
Polysaccharide deacetylase family protein.
 
  
 0.940
mma_0511
Bifuctionnal uncharacterized/N-carbamoyl-L-amino acid amidohydrolase.
 
  
0.908
mma_0031
Uncharacterized conserved protein.
 
     0.786
mma_0033
ABC-type polar amino acid transport system, ATPase component.
       0.697
mma_0034
ABC-type amino acid transport system, permease component.
       0.697
mma_0035
ABC-type amino-acid transport system, permease component.
       0.697
mma_0037
Transcriptional regulator, GntR family.
 
     0.576
argA
Amino-acid N-acetyltransferase; Belongs to the acetyltransferase family. ArgA subfamily.
  
  
 0.533
mma_0518
Transthyretin-like protein; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
   
 0.523
mma_0036
ABC transporter substrate binding protein; Belongs to the bacterial solute-binding protein 3 family.
  
  
 0.510
Your Current Organism:
Janthinobacterium sp. Marseille
NCBI taxonomy Id: 375286
Other names: J. sp. Marseille, Minibacterium massiliensis
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