STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mma_0100Hypothetical protein. (100 aa)    
Predicted Functional Partners:
tctC1
Tricarboxylate-binding receptor.
       0.496
tctB1
Small permease component of tripartite tricarboxylate transporter.
       0.478
livK1
ABC-type branched-chain amino acid transport systems, periplasmic component.
       0.462
tctA1
Tricarboxylate transport protein TctA.
       0.410
mdcA1
Malonate decarboxylase alpha subunit.
       0.410
mdcC1
Malonate decarboxylase delta subunit.
       0.410
mdcD1
Malonate decarboxylase beta subunit.
       0.410
mdcE1
Malonate decarboxylase gamma subunit.
       0.410
mdcG1
Malonate decarboxylase epsilon subunit.
       0.410
mdcB1
2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase; Involved in the formation of 2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A, the prosthetic group of the acyl-carrier protein of the malonate decarboxylase; Belongs to the CitG/MdcB family.
       0.410
Your Current Organism:
Janthinobacterium sp. Marseille
NCBI taxonomy Id: 375286
Other names: J. sp. Marseille, Minibacterium massiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.