Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
tctC1Tricarboxylate-binding receptor. (334 aa)    
Predicted Functional Partners:
tctB1
Small permease component of tripartite tricarboxylate transporter.
 
  
 0.947
tctA1
Tricarboxylate transport protein TctA.
 
  
 0.934
tctA2
Tricarboxylate transport protein TctA.
  
  
 0.834
tctA3
Tricarboxylate transport protein TctA.
  
  
 0.834
tctA4
TctA subunit of the tripartite tricarboxylate transport(TTT) family.
  
  
 0.833
tctA5
Tricarboxylate transport protein TctA.
  
  
 0.832
tctA6
Tricarboxylate transport protein TctA.
  
  
 0.832
tctB3
Small permease component of tripartite tricarboxylate transporter.
 
  
 0.814
tctB2
Small permease component of tripartite tricarboxylate transporter.
 
  
 0.805
mdcA1
Malonate decarboxylase alpha subunit.
       0.623
Your Current Organism:
Janthinobacterium sp. Marseille
NCBI taxonomy Id: 375286
Other names: J. sp. Marseille, Minibacterium massiliensis
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