Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
bfr2Bacterioferritin (cytochrome b1); Iron-storage protein. (157 aa)    
Predicted Functional Partners:
bfr1
Bacterioferritin (cytochrome b1); Iron-storage protein.
 
  
0.942
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
     
 0.912
bfd
Bacterioferritin-associated ferredoxin protein.
  
 
 0.850
mma_0643
Teichoic acid biosynthesis protein; Belongs to the glycosyltransferase 26 family.
   
  
 0.660
nasA
Nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 
 0.596
exbB2
Biopolymer transport protein ExbB.
     
 0.473
tonB
TonB-like protein.
     
 0.423
exbD3
Biopolymer transport protein ExbD.
     
 0.412
Your Current Organism:
Janthinobacterium sp. Marseille
NCBI taxonomy Id: 375286
Other names: J. sp. Marseille, Minibacterium massiliensis
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