Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
fdhA1Formate dehydrogenase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (946 aa)    
Predicted Functional Partners:
fdhB1
Formate dehydrogenase beta subunit.
 
 0.998
fdnI
Formate dehydrogenase, cytochrome b556 subunit (formate dehydrogenase gamma subunit).
 0.989
fdsD
NAD-dependent formate dehydrogenase delta subunit.
  
 0.988
fdhB2
Formate dehydrogenase, iron-sulfur subunit (formate dehydrogenase beta subunit).
 
 
 0.984
fdhC
Formate dehydrogenase, cytochrome b556 subunit.
 
 
 0.980
fdsB
NAD-dependent formate dehydrogenase beta subunit.
 
 0.978
mma_1973
Iron-sulfur binding protein.
 
 
 0.965
fdhA2
Formate dehydrogenase large subunit precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
0.933
fdsA
NAD-dependent formate dehydrogenase alpha subunit.
  
  
 
0.912
fdh
Formate dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of formate to carbon dioxide. Formate oxidation is the final step in the methanol oxidation pathway in methylotrophic microorganisms. Has a role in the detoxification of exogenous formate in non-methylotrophic organisms. Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. FDH subfamily.
     
 0.902
Your Current Organism:
Janthinobacterium sp. Marseille
NCBI taxonomy Id: 375286
Other names: J. sp. Marseille, Minibacterium massiliensis
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