Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mma_0565Uncharacterized conserved protein. (106 aa)    
Predicted Functional Partners:
mma_0563
Uncharacterized conserved protein; Response regulator/GGDEF domain protein.
   
 
 0.785
mma_0564
Signal transduction protein.
   
   0.782
sbcB
Exodeoxyribonuclease I.
       0.658
mma_0960
Hypothetical protein.
  
 
 0.522
mma_0566
Uncharacterized conserved protein.
   
   0.477
mma_2615
Sensory box/GGDEF family protein.
  
 
 0.477
mma_0561
Uncharacterized conserved protein; Predicted membrane protein.
       0.458
mma_0560
Uncharacterized conserved protein.
       0.408
gltB
Glutamate synthase (NADPH) large chain.
     
 0.406
Your Current Organism:
Janthinobacterium sp. Marseille
NCBI taxonomy Id: 375286
Other names: J. sp. Marseille, Minibacterium massiliensis
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.