Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
mma_0633Exopolysaccharide biosynthesis protein. (464 aa)    
Predicted Functional Partners:
wza
Polysaccharide export outer membrane protein.
 
 
 0.998
mma_0634
Mrp-like protein.
  
 0.994
mma_0631
Capsular polysaccharide biosynthesis glycosyltransferase.
 
  
 0.983
mma_0630
Uncharacterized conserved protein.
 
   
 0.927
xanB
Mannose-6-phosphate isomerase / mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.759
mma_0636
Hypothetical protein; Possible glycosyl transferase.
 
  
 0.738
mma_0648
Uncharacterized conserved protein; Probable polysaccharide transport protein.
 
  
 0.699
mma_0635
Exopolysaccharide biosynthesis protein.
       0.675
mma_0643
Teichoic acid biosynthesis protein; Belongs to the glycosyltransferase 26 family.
 
  
 0.621
wcaJ
Sugar transferases involved in lipopolysaccharide synthesis.
 
  
 0.605
Your Current Organism:
Janthinobacterium sp. Marseille
NCBI taxonomy Id: 375286
Other names: J. sp. Marseille, Minibacterium massiliensis
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