Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mma_0637Uncharacterized conserved protein. (471 aa)    
Predicted Functional Partners:
mma_0639
Hypothetical protein.
 
    0.873
mma_0631
Capsular polysaccharide biosynthesis glycosyltransferase.
  
  
 0.803
mma_0642
Glycosyl transferase, group 2 family protein.
 
   
 0.770
mma_0641
Glycosyl transferase, group 1 family protein.
 
  
 0.713
xanB
Mannose-6-phosphate isomerase / mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.711
mma_0643
Teichoic acid biosynthesis protein; Belongs to the glycosyltransferase 26 family.
 
   
 0.628
mma_0636
Hypothetical protein; Possible glycosyl transferase.
  
  
 0.623
mma_0634
Mrp-like protein.
  
  
 0.617
wza
Polysaccharide export outer membrane protein.
  
  
 0.604
mma_0635
Exopolysaccharide biosynthesis protein.
       0.595
Your Current Organism:
Janthinobacterium sp. Marseille
NCBI taxonomy Id: 375286
Other names: J. sp. Marseille, Minibacterium massiliensis
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