STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
livM2ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. (387 aa)    
Predicted Functional Partners:
livH2
Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
 
 0.997
livK2
ABC-type branched-chain amino acid transport systems, periplasmic component.
 
 
 0.994
mma_0665
ABC-type branched-chain amino acid transport systems, periplasmic component.
 
 
 0.988
livG2
ABC-type branched-chain amino acid transport systems, ATPase component.
  
 0.979
livF2
ABC-type branched-chain amino acid transport system ATP-binding protein.
  
 0.973
livG6
ABC-type branched-chain amino acid transport system ATP-binding protein.
  
 0.915
livH6
Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
  
 0.915
livG3
ABC-type branched-chain amino acid transport system ATP-binding protein.
  
 0.914
livF6
ABC-type branched-chain amino acid transport system ATP-binding protein.
  
 0.892
livK3
ABC-type branched-chain amino acid transport systems, periplasmic component.
 
  
 0.888
Your Current Organism:
Janthinobacterium sp. Marseille
NCBI taxonomy Id: 375286
Other names: J. sp. Marseille, Minibacterium massiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.