spr protein (Janthinobacterium sp. Marseille)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

spr

Uncharacterized conserved protein; Putative lipoprotein. (176 aa)

Predicted Functional Partners:

argM

0.815

tesA1

0.779

ftsX

0.768

mma_2676

0.471

ftsE

0.433

mltD

0.430

prc

0.426

ascD

0.422

Your Current Organism:

Janthinobacterium sp. Marseille

NCBI taxonomy Id: 375286
Other names: J. sp. Marseille, Minibacterium massiliensis

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
argM	ascD	mma_0683	mma_0684	Bifunctional succinylornithine transaminase/acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.	CDP-6-deoxy-delta-3,4-glucoseen reductase.	0.481
argM	spr	mma_0683	mma_0682	Bifunctional succinylornithine transaminase/acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.	Uncharacterized conserved protein; Putative lipoprotein.	0.815
argM	tesA1	mma_0683	mma_0681	Bifunctional succinylornithine transaminase/acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.	acyl-CoA thioesterase I precursor.	0.774
ascD	argM	mma_0684	mma_0683	CDP-6-deoxy-delta-3,4-glucoseen reductase.	Bifunctional succinylornithine transaminase/acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.	0.481
ascD	spr	mma_0684	mma_0682	CDP-6-deoxy-delta-3,4-glucoseen reductase.	Uncharacterized conserved protein; Putative lipoprotein.	0.422
ascD	tesA1	mma_0684	mma_0681	CDP-6-deoxy-delta-3,4-glucoseen reductase.	acyl-CoA thioesterase I precursor.	0.422
ftsE	ftsX	mma_3140	mma_3141	Cell division ATP-binding protein FtsE.	Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.	0.999
ftsE	spr	mma_3140	mma_0682	Cell division ATP-binding protein FtsE.	Uncharacterized conserved protein; Putative lipoprotein.	0.433
ftsX	ftsE	mma_3141	mma_3140	Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.	Cell division ATP-binding protein FtsE.	0.999
ftsX	mltD	mma_3141	mma_1208	Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.	Membrane-bound lytic murein transglycosylase D precursor.	0.469
ftsX	spr	mma_3141	mma_0682	Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.	Uncharacterized conserved protein; Putative lipoprotein.	0.768
mltD	ftsX	mma_1208	mma_3141	Membrane-bound lytic murein transglycosylase D precursor.	Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.	0.469
mltD	spr	mma_1208	mma_0682	Membrane-bound lytic murein transglycosylase D precursor.	Uncharacterized conserved protein; Putative lipoprotein.	0.430
mma_2676	spr	mma_2676	mma_0682	OmpA family protein.	Uncharacterized conserved protein; Putative lipoprotein.	0.471
prc	spr	mma_3224	mma_0682	Carboxyl-terminal processing protease; Belongs to the peptidase S41A family.	Uncharacterized conserved protein; Putative lipoprotein.	0.426
spr	argM	mma_0682	mma_0683	Uncharacterized conserved protein; Putative lipoprotein.	Bifunctional succinylornithine transaminase/acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.	0.815
spr	ascD	mma_0682	mma_0684	Uncharacterized conserved protein; Putative lipoprotein.	CDP-6-deoxy-delta-3,4-glucoseen reductase.	0.422
spr	ftsE	mma_0682	mma_3140	Uncharacterized conserved protein; Putative lipoprotein.	Cell division ATP-binding protein FtsE.	0.433
spr	ftsX	mma_0682	mma_3141	Uncharacterized conserved protein; Putative lipoprotein.	Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.	0.768
spr	mltD	mma_0682	mma_1208	Uncharacterized conserved protein; Putative lipoprotein.	Membrane-bound lytic murein transglycosylase D precursor.	0.430