Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cytc553Cytochrome c553. (106 aa)    
Predicted Functional Partners:
mma_0713
Cytochrome.
 
  
0.858
petC
Cytochrome c1 precursor.
 
 
 
 0.792
mma_3071
Probable cytochrome C.
  
     0.757
coxB
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.753
ccoO
Cb-type cytochrome c oxidase subunit II.
  
 
 0.746
mma_3571
Cytochrome c family protein.
 
 
 
 0.743
mma_3146
Uncharacterized conserved protein.
 
   
 0.726
mma_3148
Uncharacterized conserved protein; Probable transmembrane protein.
  
     0.726
ccoN
Cb-type cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.720
petA
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 
 0.704
Your Current Organism:
Janthinobacterium sp. Marseille
NCBI taxonomy Id: 375286
Other names: J. sp. Marseille, Minibacterium massiliensis
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