STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mma_0806Uncharacterized conserved protein; Putative transposition protein. (337 aa)    
Predicted Functional Partners:
mma_0807
Uncharacterized conserved protein; Putative transposase.
 
     0.944
mma_0805
Hypothetical protein.
 
     0.942
mma_0808
Hypothetical protein.
       0.784
mma_3034
Transposase.
 
     0.777
mma_3036
Hypothetical protein.
 
     0.726
mma_3033
Uncharacterized conserved protein.
 
     0.573
mma_1168
Uncharacterized conserved protein.
  
     0.564
mma_0804
Hydrolase, HAD superfamily.
       0.532
mma_1781
Putative phage-related protein.
  
     0.478
mma_1824
Blue copper protein.
  
     0.408
Your Current Organism:
Janthinobacterium sp. Marseille
NCBI taxonomy Id: 375286
Other names: J. sp. Marseille, Minibacterium massiliensis
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.