Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mma_0914Carboxymuconolactone decarboxylase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (111 aa)    
Predicted Functional Partners:
mma_0915
Glucose-1-dehydrogenase, (3-oxoacyl-(acyl carrier protein) reductase).
  
  
 0.725
mma_3619
TonB-dependent receptor for iron transport.
   
    0.722
mma_3621
TonB-dependent receptor for iron transport.
   
    0.722
mma_0925
Uncharacterized conserved protein; Belongs to the UPF0276 family.
   
  
 0.672
chrR
Transcription negative regulator ChrR.
       0.627
mma_0927
Uncharacterized conserved protein.
   
  
 0.627
mma_0924
Uncharacterized conserved protein.
   
  
 0.624
ribBA
Bifunctional riboflavin biosynthesis protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
     
 0.542
mma_0865
Hypothetical protein.
   
    0.537
purB
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
  
 0.511
Your Current Organism:
Janthinobacterium sp. Marseille
NCBI taxonomy Id: 375286
Other names: J. sp. Marseille, Minibacterium massiliensis
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