Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
fimV | mma_1079 | mma_2167 | mma_1079 | FimV type IV pilus assembly protein. | Uncharacterized conserved protein. | 0.754 |
fimV | mma_1330 | mma_2167 | mma_1330 | FimV type IV pilus assembly protein. | Protein kinase. | 0.690 |
fimV | mma_1331 | mma_2167 | mma_1331 | FimV type IV pilus assembly protein. | Serine/threonine protein phosphatase. | 0.680 |
fimV | mma_1369 | mma_2167 | mma_1369 | FimV type IV pilus assembly protein. | Uncharacterized conserved protein. | 0.767 |
fimV | mma_2857 | mma_2167 | mma_2857 | FimV type IV pilus assembly protein. | Uncharacterized conserved protein. | 0.670 |
fimV | mma_3123 | mma_2167 | mma_3123 | FimV type IV pilus assembly protein. | Uncharacterized conserved protein. | 0.752 |
fimV | pilI | mma_2167 | mma_2954 | FimV type IV pilus assembly protein. | PilI twitching motility protein. | 0.748 |
lpdA | mma_1331 | mma_0676 | mma_1331 | Dihydrolipoamide dehydrogenase. | Serine/threonine protein phosphatase. | 0.798 |
lpdA | mma_2857 | mma_0676 | mma_2857 | Dihydrolipoamide dehydrogenase. | Uncharacterized conserved protein. | 0.773 |
mma_1079 | fimV | mma_1079 | mma_2167 | Uncharacterized conserved protein. | FimV type IV pilus assembly protein. | 0.754 |
mma_1079 | mma_1330 | mma_1079 | mma_1330 | Uncharacterized conserved protein. | Protein kinase. | 0.713 |
mma_1079 | mma_1331 | mma_1079 | mma_1331 | Uncharacterized conserved protein. | Serine/threonine protein phosphatase. | 0.659 |
mma_1079 | mma_1369 | mma_1079 | mma_1369 | Uncharacterized conserved protein. | Uncharacterized conserved protein. | 0.771 |
mma_1079 | mma_2857 | mma_1079 | mma_2857 | Uncharacterized conserved protein. | Uncharacterized conserved protein. | 0.456 |
mma_1079 | mma_3123 | mma_1079 | mma_3123 | Uncharacterized conserved protein. | Uncharacterized conserved protein. | 0.740 |
mma_1079 | pilI | mma_1079 | mma_2954 | Uncharacterized conserved protein. | PilI twitching motility protein. | 0.697 |
mma_1148 | mma_1331 | mma_1148 | mma_1331 | Serine/threonine protein kinase, Pkn2 family. | Serine/threonine protein phosphatase. | 0.849 |
mma_1148 | mma_2857 | mma_1148 | mma_2857 | Serine/threonine protein kinase, Pkn2 family. | Uncharacterized conserved protein. | 0.811 |
mma_1330 | fimV | mma_1330 | mma_2167 | Protein kinase. | FimV type IV pilus assembly protein. | 0.690 |
mma_1330 | mma_1079 | mma_1330 | mma_1079 | Protein kinase. | Uncharacterized conserved protein. | 0.713 |
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