Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
yegNCation/multidrug efflux pump; Similar to yegN (Escherichia coli); Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1058 aa)    
Predicted Functional Partners:
yegM
HlyD family secretion protein; Similar to yegM (Escherichia coli); Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.939
mma_2332
Drug efflux pump transmembrane protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
  
 
0.906
tolC5
Outer membrane protein, tolC-like.
 
   0.868
yegO
AcrB/AcrD/AcrF family membrane protein; Similar to yegO (Escherichia coli); Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
    
0.784
acrA4
Membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.764
acrA1
Membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.704
def2
Formylmethionine deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.
       0.589
acrA3
Multidrug efflux system transmembrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.483
czcB1
Cation efflux system protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.461
acrA5
Acriflavin resistance lipoprotein A precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.447
Your Current Organism:
Janthinobacterium sp. Marseille
NCBI taxonomy Id: 375286
Other names: J. sp. Marseille, Minibacterium massiliensis
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