Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
mma_1702Uncharacterized conserved protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. (551 aa)    
Predicted Functional Partners:
mma_1703
Rad3-related DNA helicases.
 
     0.851
mma_3132
Uncharacterized conserved protein.
  
     0.587
mma_3007
Uncharacterized conserved protein.
  
     0.495
mma_1701
Uncharacterized conserved protein.
       0.425
mma_1912
Uncharacterized conserved protein.
  
 
 
 0.415
mma_0228
Uncharacterized conserved protein.
  
     0.407
ftsK
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
  
 
 0.405
mma_3690
Uncharacterized conserved protein.
   
 
 0.401
Your Current Organism:
Janthinobacterium sp. Marseille
NCBI taxonomy Id: 375286
Other names: J. sp. Marseille, Minibacterium massiliensis
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