STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
copB2Copper resistance protein B. (326 aa)    
Predicted Functional Partners:
copA2
Copper resistance protein A.
 
  
 0.974
copA1
Copper resistance protein A.
 
  
 0.925
copD2
Copper resistance protein D.
 
     0.848
copC2
Copper resistance signal peptide protein C.
 
   
 0.777
copS2
Sensor kinase of copper sensing two-component system; Member of a two-component regulatory system.
 
   
 0.692
mma_1824
Blue copper protein.
  
  
 0.611
copD1
Copper resistance protein D.
 
     0.604
copR2
Response regulator of copper sensing system.
 
   
 0.597
copC1
Copper resistance signal peptide protein C.
 
   
 0.517
copS1
Sensor kinase of copper sensing two-component system; Member of a two-component regulatory system.
  
     0.501
Your Current Organism:
Janthinobacterium sp. Marseille
NCBI taxonomy Id: 375286
Other names: J. sp. Marseille, Minibacterium massiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.