Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cysTABC-type tungstate transport system, periplasmic component. (234 aa)    
Predicted Functional Partners:
tupB
ABC-type tungstate transport system, permease component.
 
  
 0.974
mma_1963
ABC-type transport system, ATPase component.
 
  
  0.962
fdhD2
Formate dehydrogenase accessory protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
 
     0.876
fdhD1
Formate dehydrogenase accessory protein fdhD; Required for formate dehydrogenase (FDH) activity. Belongs to the FdhD family.
 
     0.742
mma_3655
Transcriptional regulator, LysR family.
 
    0.741
fdhA2
Formate dehydrogenase large subunit precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
     0.724
fdhB2
Formate dehydrogenase, iron-sulfur subunit (formate dehydrogenase beta subunit).
 
   
 0.690
moeA2
Molybdopterin biosynthesis protein MoeA; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
     0.673
torD
Cytoplasmic chaperone TorD.
 
    0.658
fdhC
Formate dehydrogenase, cytochrome b556 subunit.
 
     0.657
Your Current Organism:
Janthinobacterium sp. Marseille
NCBI taxonomy Id: 375286
Other names: J. sp. Marseille, Minibacterium massiliensis
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