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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
torDCytoplasmic chaperone TorD. (206 aa)    
Predicted Functional Partners:
mma_1973
Iron-sulfur binding protein.
 
  
 0.968
fdhA2
Formate dehydrogenase large subunit precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.921
mma_1974
Uncharacterized conserved protein.
 
     0.897
fdhC
Formate dehydrogenase, cytochrome b556 subunit.
 
  
 0.895
fdhB2
Formate dehydrogenase, iron-sulfur subunit (formate dehydrogenase beta subunit).
 
  
 0.890
mma_1975
Uncharacterized conserved protein.
 
    0.886
fdhD2
Formate dehydrogenase accessory protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
 
   
 0.824
fdhD1
Formate dehydrogenase accessory protein fdhD; Required for formate dehydrogenase (FDH) activity. Belongs to the FdhD family.
 
   
 0.781
tupB
ABC-type tungstate transport system, permease component.
 
     0.760
mma_0185
Uncharacterized conserved protein.
 
     0.747
Your Current Organism:
Janthinobacterium sp. Marseille
NCBI taxonomy Id: 375286
Other names: J. sp. Marseille, Minibacterium massiliensis
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