Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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[Homology]
Score
mma_1973Iron-sulfur binding protein. (699 aa)    
Predicted Functional Partners:
fdhB1
Formate dehydrogenase beta subunit.
 
 
 
 0.970
fdhA1
Formate dehydrogenase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.965
torD
Cytoplasmic chaperone TorD.
 
  
 0.965
mma_1974
Uncharacterized conserved protein.
 
     0.953
sdhA
Succinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
  
 
 0.952
mma_1975
Uncharacterized conserved protein.
 
     0.952
fdhB2
Formate dehydrogenase, iron-sulfur subunit (formate dehydrogenase beta subunit).
 
  
 0.937
fdsA
NAD-dependent formate dehydrogenase alpha subunit.
  
 
 0.937
fdhA2
Formate dehydrogenase large subunit precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
  
 0.932
nuoE
NADH dehydrogenase I chain E.
  
 
 0.920
Your Current Organism:
Janthinobacterium sp. Marseille
NCBI taxonomy Id: 375286
Other names: J. sp. Marseille, Minibacterium massiliensis
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