STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mma_1995Uncharacterized conserved protein; Sensory box/GGDEF domain/EAL domain protein. (876 aa)    
Predicted Functional Partners:
mma_2615
Sensory box/GGDEF family protein.
 
 
0.931
mma_0597
Uncharacterized conserved protein.
 
 
0.908
mma_0864
Sensory box histidine kinase/response regulator.
 
 
 0.885
mma_1577
Sensory box protein.
 
 
0.872
mma_0960
Hypothetical protein.
 
 
0.842
mma_1668
Uncharacterized conserved protein.
  
 
 0.820
mma_2141
Uncharacterized conserved protein.
 
 
0.810
purT
Phosphoribosylglycinamide formyltransferase 2; Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate; Belongs to the PurK/PurT family.
       0.782
mma_0963
Diguanylate cyclase.
 
0.747
mma_1158
Uncharacterized conserved protein.
 
 
0.738
Your Current Organism:
Janthinobacterium sp. Marseille
NCBI taxonomy Id: 375286
Other names: J. sp. Marseille, Minibacterium massiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.