STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mma_2003Uncharacterized conserved protein; Probable hydrolase. (303 aa)    
Predicted Functional Partners:
ldcA
Muramoyltetrapeptide carboxypeptidase.
       0.816
mma_2004
Uncharacterized conserved protein.
 
   
 0.751
mma_2005
Transcriptional regulator, GntR family.
       0.472
acd
acyl-CoA dehydrogenase.
  
 
  0.466
maoC
Acyl dehydratase.
  
 
 0.453
apaH
Bis(5'-nucleosyl)-tetraphosphatase (symmetrical); Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
    
  0.434
mma_2001
ATPase components of ABC transporters with duplicated ATPase domains.
       0.422
mhpD
2-keto-4-pentenoate hydratase.
 
  
 0.420
mma_3091
acyl-CoA dehydrogenase oxidoreductase protein.
  
 
  0.411
Your Current Organism:
Janthinobacterium sp. Marseille
NCBI taxonomy Id: 375286
Other names: J. sp. Marseille, Minibacterium massiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.