Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mma_2040Uncharacterized conserved protein. (151 aa)    
Predicted Functional Partners:
hflC1
Membrane protease subunit.
 
 
 0.934
cobS
Cobalamin (5'-phosphate) synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
   
    0.854
mma_2205
Uncharacterized conserved protein.
  
  
 0.777
mma_0619
Uncharacterized conserved protein.
  
     0.748
mma_1457
Uncharacterized conserved protein.
  
     0.698
bph1
Histone H1 protein.
  
     0.679
mma_1107
Uncharacterized conserved protein.
  
     0.654
mma_0291
Porin.
  
     0.639
mma_3185
Uncharacterized conserved protein.
  
     0.636
mma_2336
Uncharacterized conserved protein.
  
    0.624
Your Current Organism:
Janthinobacterium sp. Marseille
NCBI taxonomy Id: 375286
Other names: J. sp. Marseille, Minibacterium massiliensis
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