Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
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[Homology]
Score
flhFFlhF flagellar biosynthesis protein. (421 aa)    
Predicted Functional Partners:
fleN
FleN flagellar synthesis regulator.
 
 
 0.995
flhA
FlhA flagellar biosynthesis protein; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
 
  
 0.991
flhB
FlhB flagellar biosynthetic protein; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.
 
  
 0.989
fliM
FliM flagellar motor switch protein.
 
 
 0.980
fliO
FliO flagellar protein.
 
  
 0.978
flgJ
Flagellum-specific muramidase.
 
  
 0.974
fliG
FliG flagellar motor switch protein.
 
 
 0.971
fliE
FliE flagellar hook-basal body protein.
 
  
 0.961
fliH
FliH flagellar biosynthesis/type III secretory pathway protein.
 
  
 0.954
fliK
Flagellar hook-length control protein.
 
  
 0.952
Your Current Organism:
Janthinobacterium sp. Marseille
NCBI taxonomy Id: 375286
Other names: J. sp. Marseille, Minibacterium massiliensis
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