Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
glcD3FAD/FMN-containing dehydrogenase. (468 aa)    
Predicted Functional Partners:
wrbA
Trp repressor binding protein; Belongs to the WrbA family.
     
 0.831
mma_2181
Uncharacterized conserved protein.
       0.829
mma_2183
Uncharacterized conserved protein.
       0.700
rbn
Ribonuclease BN transmembrane protein.
       0.651
etfB
Electron transfer flavoprotein beta subunit.
 
 
 0.629
etfA
Electron transfer flavoprotein alpha subunit.
 
 
 0.625
fdhB1
Formate dehydrogenase beta subunit.
   
 0.470
lldD
L-lactate dehydrogenase (cytochrome).
  
 0.461
coxB
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
   
 
 0.461
gltB
Glutamate synthase (NADPH) large chain.
     
 0.438
Your Current Organism:
Janthinobacterium sp. Marseille
NCBI taxonomy Id: 375286
Other names: J. sp. Marseille, Minibacterium massiliensis
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