mma_2240 protein (Janthinobacterium sp. Marseille)

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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[Homology]

Score

mma_2240

Uncharacterized conserved protein; Probable transmembrane protein. (154 aa)

Predicted Functional Partners:

greA

0.842

carB

0.650

carA

0.650

mma_2855

0.624

mma_0675

0.595

mma_0590

0.558

mma_1760

0.501

cobD1

0.496

mma_1264

0.487

mma_0284

0.469

Your Current Organism:

Janthinobacterium sp. Marseille

NCBI taxonomy Id: 375286
Other names: J. sp. Marseille, Minibacterium massiliensis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
carA	carB	mma_2243	mma_2242	Carbamoylphosphate synthase small subunit; Belongs to the CarA family.	Carbamoyl-phosphate synthase large chain; Belongs to the CarB family.	0.999
carA	greA	mma_2243	mma_2241	Carbamoylphosphate synthase small subunit; Belongs to the CarA family.	GreA transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	0.655
carA	mma_2240	mma_2243	mma_2240	Carbamoylphosphate synthase small subunit; Belongs to the CarA family.	Uncharacterized conserved protein; Probable transmembrane protein.	0.650
carB	carA	mma_2242	mma_2243	Carbamoyl-phosphate synthase large chain; Belongs to the CarB family.	Carbamoylphosphate synthase small subunit; Belongs to the CarA family.	0.999
carB	greA	mma_2242	mma_2241	Carbamoyl-phosphate synthase large chain; Belongs to the CarB family.	GreA transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	0.749
carB	mma_2240	mma_2242	mma_2240	Carbamoyl-phosphate synthase large chain; Belongs to the CarB family.	Uncharacterized conserved protein; Probable transmembrane protein.	0.650
cobD1	mma_2240	mma_0596	mma_2240	Cobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.	Uncharacterized conserved protein; Probable transmembrane protein.	0.496
greA	carA	mma_2241	mma_2243	GreA transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	Carbamoylphosphate synthase small subunit; Belongs to the CarA family.	0.655
greA	carB	mma_2241	mma_2242	GreA transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	Carbamoyl-phosphate synthase large chain; Belongs to the CarB family.	0.749
greA	mma_2240	mma_2241	mma_2240	GreA transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	Uncharacterized conserved protein; Probable transmembrane protein.	0.842
mma_0284	mma_0590	mma_0284	mma_0590	Uncharacterized conserved protein.	Uncharacterized conserved protein.	0.454
mma_0284	mma_2240	mma_0284	mma_2240	Uncharacterized conserved protein.	Uncharacterized conserved protein; Probable transmembrane protein.	0.469
mma_0590	mma_0284	mma_0590	mma_0284	Uncharacterized conserved protein.	Uncharacterized conserved protein.	0.454
mma_0590	mma_1760	mma_0590	mma_1760	Uncharacterized conserved protein.	Hypothetical protein; Partially similar to heavy metal sensor kinase.	0.633
mma_0590	mma_2240	mma_0590	mma_2240	Uncharacterized conserved protein.	Uncharacterized conserved protein; Probable transmembrane protein.	0.558
mma_0675	mma_2240	mma_0675	mma_2240	Uncharacterized conserved protein.	Uncharacterized conserved protein; Probable transmembrane protein.	0.595
mma_1264	mma_2240	mma_1264	mma_2240	Uncharacterized conserved protein.	Uncharacterized conserved protein; Probable transmembrane protein.	0.487
mma_1760	mma_0590	mma_1760	mma_0590	Hypothetical protein; Partially similar to heavy metal sensor kinase.	Uncharacterized conserved protein.	0.633
mma_1760	mma_2240	mma_1760	mma_2240	Hypothetical protein; Partially similar to heavy metal sensor kinase.	Uncharacterized conserved protein; Probable transmembrane protein.	0.501
mma_2240	carA	mma_2240	mma_2243	Uncharacterized conserved protein; Probable transmembrane protein.	Carbamoylphosphate synthase small subunit; Belongs to the CarA family.	0.650