Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
wcaJSugar transferases involved in lipopolysaccharide synthesis. (180 aa)    
Predicted Functional Partners:
wcaG
Nucleoside-diphosphate-sugar epimerases.
  
 0.953
xanB
Mannose-6-phosphate isomerase / mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.923
mma_2254
Nucleoside-diphosphate sugar epimerases.
 
  
 0.917
mma_2260
Glycosyltransferase.
  
 0.909
mma_0634
Mrp-like protein.
 
  
 0.824
wza
Polysaccharide export outer membrane protein.
 
  
 0.814
mma_2258
Capsular polysaccharide synthesis enzyme.
 
  
 0.777
mma_2261
Glycosyltransferase.
 
  
 0.721
rfbD2
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.
  
  
 0.700
spsCA
Spore coat biosynthesis protein; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.698
Your Current Organism:
Janthinobacterium sp. Marseille
NCBI taxonomy Id: 375286
Other names: J. sp. Marseille, Minibacterium massiliensis
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