Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mma_2279Uncharacterized conserved protein; Putative acetyltransferase. (170 aa)    
Predicted Functional Partners:
wecE2
DegT/DnrJ/EryC1/StrS aminotransferase family enzyme; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.976
spsCA
Spore coat biosynthesis protein; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.965
mma_2278
Uncharacterized conserved protein; Putative oxidoreductase.
 
  
 0.882
mma_2268
Hypothetical protein.
 
  
 0.859
mma_0631
Capsular polysaccharide biosynthesis glycosyltransferase.
  
  
 0.851
mma_2277
UDP-glucose 4-epimerase.
 
  
 0.840
wbpG
LPS biosynthesis protein WbpG.
 
    0.809
mma_2275
UDP-glucose 4-epimerase.
  
  
 0.798
mma_2274
Uncharacterized conserved protein; Putative phosphoesterase.
       0.791
rfbC
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.769
Your Current Organism:
Janthinobacterium sp. Marseille
NCBI taxonomy Id: 375286
Other names: J. sp. Marseille, Minibacterium massiliensis
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